Publications

My publications and preprints are collected here along with links to the article, accepted version, and any relevant code.

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Eggl, M.F. , Wagle, S., Filling, J.P., Chater, T.E., Goda, Y., and Tchumatchenko, T. SpyDen: Simplifying molecular and structural analysis across spines and dendrites, 2024, Article

BibTeX reference

 @article{eggl_2024_spyden,
   title={SpyDen: Simplifying molecular and structural analysis across spines and dendrites},
   author={Maximilian F. Eggl and Surbhit Wagle and Jean P. Filling and Thomas E. Chater and Yukiko Goda and Tatjana Tchumatchenko},
   journal={Bioinformatics},
   year={2025},
   doi={https://doi.org/10.1093/bioinformatics/btaf339},
 }

Wieczorek, T.J., Tchumatchenko, T., Wert-Carvajal, C., and Eggl, M.F. . A framework for the emergence and analysis of language in social learning agents, 2024, Article

BibTeX reference

 @article{wieczorek_eggl_2024_language,
   title={A framework for the emergence and analysis of language in social learning agents},
   author={Tobias J. Wieczorek and Tatjana Tchumatchenko and Carlos Wert-Carvajal and Maximilian F. Eggl},
   journal={Nature Communications},
   volume={15},
   number={1},
   pages={7590},
   year={2024},
   doi={https://doi.org/10.1038/s41467-024-51887-5},
 }

Carruth, J., Eggl, M.F. , Fefferman, C., and Rowley, C.W. Controlling unknown linear dynamics with almost optimal regret, 2024, Article

BibTeX reference

 @article{carruth_eggl_2024_almost,
   title={Controlling unknown linear dynamics with almost optimal regret},
   author={Jacob Carruth and Maximilian F. Eggl and Charles Fefferman and Clarence W. Rowley},
   journal={Revista Matemática Iberoamericana},
   year={2024},
   doi={https://doi.org/10.4171/RMI/1511},
 }

Carruth, J., Eggl, M.F. , Fefferman, C. and Rowley, C.W.Optimal agnostic control of unknown linear dynamics in a bounded parameter range, 2024, Article

BibTeX reference

 @article{carruth_eggl_2024_optimal,
   title={Optimal agnostic control of unknown linear dynamics in a bounded parameter range},
   author={Jacob Carruth and Maximilian F. Eggl and Charles Fefferman and Clarence W. Rowley},
   journal={Revista Matemática Iberoamericana},
   year={2024},
   doi={https://doi.org/10.4171/RMI/1510},
 }

Chater, T.E., Eggl, M.F. , Goda, Y., and Tchumatchenko, T. Competitive processes shape multi-synapse plasticity along dendritic segments, 2024, Article

BibTeX reference

 @article{chater_eggl_2024_multisynapse,
   title={Competitive processes shape multi-synapse plasticity along dendritic segments},
   author={Thomas E. Chater and Maximilian F. Eggl and Yukiko Goda and Tatjana Tchumatchenko},
   journal={Nature Communications},
   volume={15},
   number={1},
   pages={7572},
   year={2024},
   doi={XXX},
   url={XXX}
 }

Eggl, M.F. , Chater, T.E., Petkovic, J., Goda, Y., and Tchumatchenko, T. Linking spontaneous and stimulated spine dynamics, 2023, Article

BibTeX reference

 @article{eggl_chater_2023_spine,
   title={Linking spontaneous and stimulated spine dynamics},
   author={Maximilian F. Eggl and Thomas E. Chater and Janko Petkovic and Yukiko Goda and Tatjana Tchumatchenko},
   journal={Communications Biology},
   volume={6},
   number={1},
   pages={930},
   year={2023},
   doi={XXX},
   url={XXX}
 }

Carruth, J. , Eggl, M.F. , Fefferman, C., Rowley, C.W., and Weber, M. Controlling unknown linear dynamics with bounded multiplicative regret, 2022, Article

BibTeX reference

 @article{carruth_eggl_2022_bounded,
   title={Controlling unknown linear dynamics with bounded multiplicative regret},
   author={Jacob Carruth and Maximilian F. Eggl and Charles Fefferman and Clarence W. Rowley and Melanie Weber},
   journal={Revista Matemática Iberoamericana},
   volume={38},
   number={7},
   pages={2185--2216},
   year={2022},
   doi={XXX},
   url={XXX}
 }

Eggl, M.F. and Schmid, P.J. Shape optimization of stirring rods for mixing binary fluids, 2022, Article

BibTeX reference

 @article{eggl_schmid_2022_shape,
   title={Shape optimization of stirring rods for mixing binary fluids},
   author={Maximilian F. Eggl and Peter J. Schmid},
   journal={IMA Journal of Applied Mathematics},
   volume={85},
   number={5},
   pages={762--789},
   year={2022},
   doi={XXX},
   url={XXX}
 }

Eggl, M.F. and Schmid, P.J. Mixing by stirring: Optimizing shapes and strategies, 2022, Article

BibTeX reference

 @article{eggl_schmid_2022_mixing,
   title={Mixing by stirring: Optimizing shapes and strategies},
   author={Maximilian F. Eggl and Peter J. Schmid},
   journal={Physical Review Fluids},
   volume={7},
   number={7},
   pages={073904},
   year={2022},
   doi={XXX},
   url={XXX}
 }

Skene, C.S., Eggl, M.F. , and Schmid, P.J. A parallel-in-time approach for accelerating direct-adjoint studies, 2021, Article

BibTeX reference

 @article{skene_eggl_2021_parallel,
   title={A parallel-in-time approach for accelerating direct-adjoint studies},
   author={Calum S. Skene and Maximilian F. Eggl and Peter J. Schmid},
   journal={Journal of Computational Physics},
   volume={429},
   pages={110033},
   year={2021},
   doi={XXX},
   url={XXX}
 }

Eggl, M.F. and Schmid, P.J. Mixing enhancement in binary fluids using optimised stirring strategies, 2020, Article

BibTeX reference

 @article{eggl_schmid_2020_mixing,
   title={Mixing enhancement in binary fluids using optimised stirring strategies},
   author={Maximilian F. Eggl and Peter J. Schmid},
   journal={Journal of Fluid Mechanics},
   volume={899},
   pages={A24},
   year={2020},
   doi={XXX},
   url={XXX}
 }

Eggl, M.F. and Schmid, P.J. A gradient-based framework for maximizing mixing in binary fluids, 2018, Article

BibTeX reference

 @article{eggl_schmid_2018_gradient,
   title={A gradient-based framework for maximizing mixing in binary fluids},
   author={Maximilian F. Eggl and Peter J. Schmid},
   journal={Journal of Computational Physics},
   volume={368},
   pages={131--153},
   year={2018},
   doi={XXX},
   url={XXX}
 }